Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm39404-201ENSMUST00000216350 313 ntBASIC14.12□□□□□ -0.15
Gm28047Q3US59 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm28047Q3US59 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Gm4034-201ENSMUST00000187674 480 ntBASIC14.11□□□□□ -0.15
Gm28047Q3US59 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.11□□□□□ -0.15
Gm28047Q3US59 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.11□□□□□ -0.15
Gm28047Q3US59 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm28047Q3US59 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.1□□□□□ -0.15
Gm28047Q3US59 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.1□□□□□ -0.15
Gm28047Q3US59 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.1□□□□□ -0.15
Gm28047Q3US59 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.1□□□□□ -0.15
Gm28047Q3US59 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.1□□□□□ -0.15
Gm28047Q3US59 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm28047Q3US59 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm28047Q3US59 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms