Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm9022-201ENSMUST00000182482 992 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm27243-201ENSMUST00000183964 521 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm24136-201ENSMUST00000083374 165 ntBASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Brf2Q3UAW9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Gm18187-201ENSMUST00000196476 984 ntBASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Snora73a-201ENSMUST00000082453 205 ntBASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brf2Q3UAW9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brf2Q3UAW9 Gm13829-201ENSMUST00000119600 138 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms