Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm10268-201ENSMUST00000085340 555 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cul4aQ3TCH7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cul4aQ3TCH7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm29649-201ENSMUST00000185649 419 ntBASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm29127-201ENSMUST00000188304 517 ntBASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cul4aQ3TCH7 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cul4aQ3TCH7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms