Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm29615-201ENSMUST00000185371 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28224-201ENSMUST00000186078 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm29001-201ENSMUST00000186177 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28292-201ENSMUST00000186593 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28101-201ENSMUST00000187608 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm29076-201ENSMUST00000187689 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28302-201ENSMUST00000187931 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28646-201ENSMUST00000188220 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28205-201ENSMUST00000189177 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm29032-201ENSMUST00000189797 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm28695-201ENSMUST00000190300 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm37448-201ENSMUST00000192795 697 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.42□□□□□ -0.26
Col9a2Q07643 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.42□□□□□ -0.26
Col9a2Q07643 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm5369-201ENSMUST00000217499 588 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col9a2Q07643 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.42□□□□□ -0.26
Col9a2Q07643 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a2Q07643 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.41□□□□□ -0.26
Col9a2Q07643 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Gm43947-201ENSMUST00000203019 959 ntBASIC13.41□□□□□ -0.26
Col9a2Q07643 Gm44100-201ENSMUST00000204329 436 ntBASIC13.41□□□□□ -0.26
Col9a2Q07643 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Gm5455-201ENSMUST00000058710 715 ntBASIC13.41□□□□□ -0.26
Col9a2Q07643 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col9a2Q07643 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a2Q07643 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms