Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Notch1Q01705 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC8.98□□□□□ -0.97
Notch1Q01705 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Notch1Q01705 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.98□□□□□ -0.97
Notch1Q01705 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC8.98□□□□□ -0.97
Notch1Q01705 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Notch1Q01705 Gm3332-201ENSMUST00000189337 928 ntBASIC8.98□□□□□ -0.97
Notch1Q01705 Gm43184-201ENSMUST00000197247 542 ntBASIC8.98□□□□□ -0.97
Notch1Q01705 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC8.98□□□□□ -0.97
Notch1Q01705 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC8.98□□□□□ -0.97
Notch1Q01705 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Notch1Q01705 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm23085-201ENSMUST00000157849 293 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm7278-201ENSMUST00000119836 1401 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm12623-201ENSMUST00000119849 1983 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Notch1Q01705 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm12218-201ENSMUST00000117666 399 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Gm11422-201ENSMUST00000118925 1103 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC8.97□□□□□ -0.97
Notch1Q01705 AC168279.1-201ENSMUST00000214611 382 ntBASIC8.97□□□□□ -0.97
Notch1Q01705 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Notch1Q01705 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Notch1Q01705 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Gm9129-201ENSMUST00000218173 1689 ntBASIC8.96□□□□□ -0.97
Notch1Q01705 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Notch1Q01705 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Notch1Q01705 Gm15352-201ENSMUST00000118696 270 ntBASIC8.96□□□□□ -0.97
Notch1Q01705 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC8.96□□□□□ -0.97
Notch1Q01705 Gm43752-201ENSMUST00000198475 697 ntBASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms