Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.77□□□□□ -0.52
Nkx3-2P97503 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx3-2P97503 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm25214-201ENSMUST00000104573 129 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm29199-201ENSMUST00000187766 775 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm44405-201ENSMUST00000198952 126 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm18056-201ENSMUST00000207670 568 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm18061-201ENSMUST00000208350 562 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm18063-201ENSMUST00000208529 568 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm18052-201ENSMUST00000208750 559 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.77□□□□□ -0.53
Nkx3-2P97503 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx3-2P97503 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx3-2P97503 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm24830-201ENSMUST00000102024 166 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm25890-201ENSMUST00000177643 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm22614-201ENSMUST00000178300 165 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm8885-201ENSMUST00000189382 598 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.76□□□□□ -0.53
Nkx3-2P97503 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx3-2P97503 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms