Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm44958-201ENSMUST00000203734 736 ntBASIC13.51□□□□□ -0.25
Trim43cP86449 Gm6007-201ENSMUST00000208170 823 ntBASIC13.51□□□□□ -0.25
Trim43cP86449 Gm10608-202ENSMUST00000213924 676 ntBASIC13.51□□□□□ -0.25
Trim43cP86449 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim43cP86449 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Trim43cP86449 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim43cP86449 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trim43cP86449 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim43cP86449 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.5□□□□□ -0.25
Trim43cP86449 Gm4986-201ENSMUST00000119731 549 ntBASIC13.5□□□□□ -0.25
Trim43cP86449 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Gm6013-201ENSMUST00000212264 699 ntBASIC13.5□□□□□ -0.25
Trim43cP86449 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.5□□□□□ -0.25
Trim43cP86449 Gm7399-201ENSMUST00000032395 858 ntBASIC13.5□□□□□ -0.25
Trim43cP86449 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim43cP86449 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim43cP86449 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim43cP86449 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim43cP86449 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim43cP86449 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim43cP86449 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Trim43cP86449 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim43cP86449 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim43cP86449 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Gm27516-201ENSMUST00000184237 98 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 Gm28882-201ENSMUST00000185504 314 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 Gm6621-201ENSMUST00000193251 772 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim43cP86449 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim43cP86449 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.49□□□□□ -0.25
Trim43cP86449 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trim43cP86449 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim43cP86449 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim43cP86449 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim43cP86449 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trim43cP86449 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim43cP86449 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim43cP86449 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.48□□□□□ -0.25
Trim43cP86449 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.48□□□□□ -0.25
Trim43cP86449 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms