Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.58□□□□□ -0.56
SgcdP82347 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.58□□□□□ -0.56
SgcdP82347 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.58□□□□□ -0.56
SgcdP82347 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SgcdP82347 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SgcdP82347 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm12390-201ENSMUST00000117897 397 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.57□□□□□ -0.56
SgcdP82347 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Gm27486-201ENSMUST00000184923 80 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Mir7654-201ENSMUST00000185082 70 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm5279-201ENSMUST00000199575 745 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Gm45331-201ENSMUST00000209868 554 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.57□□□□□ -0.56
SgcdP82347 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.57□□□□□ -0.56
SgcdP82347 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgcdP82347 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcdP82347 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgcdP82347 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.56□□□□□ -0.56
SgcdP82347 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.56□□□□□ -0.56
SgcdP82347 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgcdP82347 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SgcdP82347 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SgcdP82347 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
SgcdP82347 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.56□□□□□ -0.56
SgcdP82347 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgcdP82347 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgcdP82347 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms