Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Lsm6P62313 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lsm6P62313 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Lsm6P62313 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Lsm6P62313 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Mir1247-201ENSMUST00000116706 82 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Gm11425-201ENSMUST00000119608 498 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.91□□□□□ -0.66
Lsm6P62313 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm5370-201ENSMUST00000187187 574 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lsm6P62313 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm9396-201ENSMUST00000076703 567 ntBASIC10.91□□□□□ -0.66
Lsm6P62313 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm6P62313 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.91□□□□□ -0.66
Lsm6P62313 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm6P62313 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Lsm6P62313 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Lsm6P62313 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm13342-201ENSMUST00000121055 207 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm23119-201ENSMUST00000158610 140 ntBASIC10.9□□□□□ -0.66
Lsm6P62313 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm6P62313 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms