Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Uchl4P58321 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Uchl4P58321 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Uchl4P58321 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Uchl4P58321 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Uchl4P58321 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Uchl4P58321 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.21□□□□□ -0.3
Uchl4P58321 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.21□□□□□ -0.3
Uchl4P58321 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Uchl4P58321 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.21□□□□□ -0.3
Uchl4P58321 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Uchl4P58321 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm15808-201ENSMUST00000119046 604 ntBASIC13.2□□□□□ -0.3
Uchl4P58321 Gm15547-201ENSMUST00000122152 333 ntBASIC13.2□□□□□ -0.3
Uchl4P58321 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm4857-201ENSMUST00000192718 785 ntBASIC13.2□□□□□ -0.3
Uchl4P58321 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.2□□□□□ -0.3
Uchl4P58321 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.2□□□□□ -0.3
Uchl4P58321 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Uchl4P58321 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Uchl4P58321 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Uchl4P58321 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.2□□□□□ -0.3
Uchl4P58321 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Uchl4P58321 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Uchl4P58321 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.19□□□□□ -0.3
Uchl4P58321 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm8712-201ENSMUST00000221090 701 ntBASIC13.19□□□□□ -0.3
Uchl4P58321 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.19□□□□□ -0.3
Uchl4P58321 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Uchl4P58321 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm10076-201ENSMUST00000073238 384 ntBASIC13.19□□□□□ -0.3
Uchl4P58321 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.19□□□□□ -0.3
Uchl4P58321 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Uchl4P58321 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Uchl4P58321 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Uchl4P58321 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.19□□□□□ -0.3
Uchl4P58321 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uchl4P58321 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uchl4P58321 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Uchl4P58321 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms