Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Atxn1P54254 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atxn1P54254 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atxn1P54254 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.36□□□□□ -0.43
Atxn1P54254 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atxn1P54254 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.36□□□□□ -0.43
Atxn1P54254 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Gm19287-201ENSMUST00000203190 358 ntBASIC12.36□□□□□ -0.43
Atxn1P54254 Gm43916-201ENSMUST00000205062 967 ntBASIC12.36□□□□□ -0.43
Atxn1P54254 Gm5369-201ENSMUST00000217499 588 ntBASIC12.36□□□□□ -0.43
Atxn1P54254 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Gm25517-201ENSMUST00000083865 134 ntBASIC12.36□□□□□ -0.43
Atxn1P54254 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Atxn1P54254 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Atxn1P54254 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atxn1P54254 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.36□□□□□ -0.43
Atxn1P54254 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atxn1P54254 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Atxn1P54254 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Atxn1P54254 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm25880-201ENSMUST00000104331 132 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Gm13492-201ENSMUST00000119772 665 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.35□□□□□ -0.43
Atxn1P54254 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm37201-201ENSMUST00000191845 523 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Atxn1P54254 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Atxn1P54254 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Atxn1P54254 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.35□□□□□ -0.43
Atxn1P54254 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Atxn1P54254 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.34□□□□□ -0.43
Atxn1P54254 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Atxn1P54254 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms