Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.33□□□□□ -0.44
Krt6aP50446 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.33□□□□□ -0.44
Krt6aP50446 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Krt6aP50446 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Krt6aP50446 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Krt6aP50446 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Krt6aP50446 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.32□□□□□ -0.44
Krt6aP50446 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.32□□□□□ -0.44
Krt6aP50446 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Krt6aP50446 Gm38092-201ENSMUST00000195600 653 ntBASIC12.32□□□□□ -0.44
Krt6aP50446 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.32□□□□□ -0.44
Krt6aP50446 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Gm5356-201ENSMUST00000093326 615 ntBASIC12.32□□□□□ -0.44
Krt6aP50446 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.32□□□□□ -0.44
Krt6aP50446 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.32□□□□□ -0.44
Krt6aP50446 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.32□□□□□ -0.44
Krt6aP50446 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Krt6aP50446 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Krt6aP50446 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
Krt6aP50446 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Krt6aP50446 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Gm14928-201ENSMUST00000120198 477 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.31□□□□□ -0.44
Krt6aP50446 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.31□□□□□ -0.44
Krt6aP50446 Gm35960-201ENSMUST00000202712 767 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.31□□□□□ -0.44
Krt6aP50446 Gm17794-201ENSMUST00000220252 955 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Krt6aP50446 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.31□□□□□ -0.44
Krt6aP50446 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Krt6aP50446 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Krt6aP50446 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.3□□□□□ -0.44
Krt6aP50446 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt6aP50446 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Krt6aP50446 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt6aP50446 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt6aP50446 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Krt6aP50446 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Krt6aP50446 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms