Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Gm45224-201ENSMUST00000208203 414 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Gzmn-202ENSMUST00000225535 989 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Shmt1P50431 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.13□□□□□ -0.31
Shmt1P50431 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Shmt1P50431 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shmt1P50431 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.13□□□□□ -0.31
Shmt1P50431 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Shmt1P50431 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.12□□□□□ -0.31
Shmt1P50431 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.12□□□□□ -0.31
Shmt1P50431 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.12□□□□□ -0.31
Shmt1P50431 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.12□□□□□ -0.31
Shmt1P50431 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.12□□□□□ -0.31
Shmt1P50431 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.12□□□□□ -0.31
Shmt1P50431 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.12□□□□□ -0.31
Shmt1P50431 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Shmt1P50431 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.12□□□□□ -0.31
Shmt1P50431 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shmt1P50431 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Shmt1P50431 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Shmt1P50431 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm15276-201ENSMUST00000145953 498 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gm6963-201ENSMUST00000147879 379 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm5070-201ENSMUST00000177599 862 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gm25700-201ENSMUST00000177693 110 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shmt1P50431 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.11□□□□□ -0.31
Shmt1P50431 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.11□□□□□ -0.31
Shmt1P50431 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.11□□□□□ -0.31
Shmt1P50431 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms