Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Gm11814-201ENSMUST00000119515 929 ntBASIC12.7□□□□□ -0.38
SftpbP50405 Gm15703-201ENSMUST00000120250 880 ntBASIC12.7□□□□□ -0.38
SftpbP50405 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.7□□□□□ -0.38
SftpbP50405 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.7□□□□□ -0.38
SftpbP50405 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.7□□□□□ -0.38
SftpbP50405 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.7□□□□□ -0.38
SftpbP50405 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.7□□□□□ -0.38
SftpbP50405 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.7□□□□□ -0.38
SftpbP50405 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SftpbP50405 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SftpbP50405 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Gm24231-201ENSMUST00000104315 133 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Gm4271-201ENSMUST00000174444 973 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Gm27839-201ENSMUST00000184242 106 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Gm27486-201ENSMUST00000184923 80 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SftpbP50405 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SftpbP50405 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SftpbP50405 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SftpbP50405 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.69□□□□□ -0.38
SftpbP50405 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SftpbP50405 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.68□□□□□ -0.38
SftpbP50405 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
SftpbP50405 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.68□□□□□ -0.38
SftpbP50405 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SftpbP50405 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.68□□□□□ -0.38
SftpbP50405 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SftpbP50405 Gm24644-201ENSMUST00000157114 139 ntBASIC12.68□□□□□ -0.38
SftpbP50405 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms