Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfsf4P43488 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm12138-201ENSMUST00000122180 951 ntBASIC11.98□□□□□ -0.49
Tnfsf4P43488 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm24644-201ENSMUST00000157114 139 ntBASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm9002-201ENSMUST00000178437 499 ntBASIC11.98□□□□□ -0.49
Tnfsf4P43488 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.98□□□□□ -0.49
Tnfsf4P43488 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf4P43488 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm11964-201ENSMUST00000120982 444 ntBASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm9022-201ENSMUST00000182482 992 ntBASIC11.97□□□□□ -0.49
Tnfsf4P43488 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.97□□□□□ -0.49
Tnfsf4P43488 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf4P43488 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tnfsf4P43488 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms