Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.8□□□□□ -0.36
Nfkb1P25799 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nfkb1P25799 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nfkb1P25799 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm13296-201ENSMUST00000117854 997 ntBASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Rprl1-202ENSMUST00000198476 238 ntBASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.79□□□□□ -0.36
Nfkb1P25799 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.79□□□□□ -0.36
Nfkb1P25799 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.79□□□□□ -0.36
Nfkb1P25799 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.79□□□□□ -0.36
Nfkb1P25799 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nfkb1P25799 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.78□□□□□ -0.36
Nfkb1P25799 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Gm9022-201ENSMUST00000182482 992 ntBASIC12.78□□□□□ -0.36
Nfkb1P25799 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.78□□□□□ -0.36
Nfkb1P25799 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Gm8385-201ENSMUST00000058999 643 ntBASIC12.78□□□□□ -0.36
Nfkb1P25799 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nfkb1P25799 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.78□□□□□ -0.36
Nfkb1P25799 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nfkb1P25799 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nfkb1P25799 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nfkb1P25799 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nfkb1P25799 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.77□□□□□ -0.36
Nfkb1P25799 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm12015-201ENSMUST00000117065 843 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm13996-201ENSMUST00000118456 430 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm18304-201ENSMUST00000189162 546 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Gm8913-201ENSMUST00000209491 641 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Nfkb1P25799 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.77□□□□□ -0.37
Nfkb1P25799 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms