Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Col8a2P25318 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.36□□□□□ -0.75
Col8a2P25318 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm27023-201ENSMUST00000182372 285 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Gm27341-201ENSMUST00000183570 106 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Col8a2P25318 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.36□□□□□ -0.75
Col8a2P25318 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.36□□□□□ -0.75
Col8a2P25318 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Col8a2P25318 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.35□□□□□ -0.75
Col8a2P25318 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.35□□□□□ -0.75
Col8a2P25318 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.35□□□□□ -0.75
Col8a2P25318 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.35□□□□□ -0.75
Col8a2P25318 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.35□□□□□ -0.75
Col8a2P25318 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Col8a2P25318 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a2P25318 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.35□□□□□ -0.75
Col8a2P25318 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms