Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.67□□□□□ -0.54
Clk1P22518 Gm16177-201ENSMUST00000120728 718 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Gm17208-201ENSMUST00000168388 535 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Gm23363-201ENSMUST00000175024 79 ntBASIC11.67□□□□□ -0.54
Clk1P22518 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Gm43433-201ENSMUST00000196573 481 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.67□□□□□ -0.54
Clk1P22518 Gm19163-201ENSMUST00000223313 780 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clk1P22518 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clk1P22518 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clk1P22518 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.67□□□□□ -0.54
Clk1P22518 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Clk1P22518 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.67□□□□□ -0.54
Clk1P22518 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Clk1P22518 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Clk1P22518 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Clk1P22518 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Clk1P22518 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.66□□□□□ -0.54
Clk1P22518 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.66□□□□□ -0.54
Clk1P22518 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Clk1P22518 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Gm10268-201ENSMUST00000085340 555 ntBASIC11.66□□□□□ -0.54
Clk1P22518 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.66□□□□□ -0.54
Clk1P22518 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.66□□□□□ -0.54
Clk1P22518 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.66□□□□□ -0.54
Clk1P22518 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Clk1P22518 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clk1P22518 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms