Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VimP20152 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VimP20152 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
VimP20152 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VimP20152 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
VimP20152 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.58□□□□□ -0.39
VimP20152 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
VimP20152 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VimP20152 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.58□□□□□ -0.4
VimP20152 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
VimP20152 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.58□□□□□ -0.4
VimP20152 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.58□□□□□ -0.4
VimP20152 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.58□□□□□ -0.4
VimP20152 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VimP20152 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.58□□□□□ -0.4
VimP20152 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VimP20152 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.58□□□□□ -0.4
VimP20152 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VimP20152 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.57□□□□□ -0.4
VimP20152 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VimP20152 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.57□□□□□ -0.4
VimP20152 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.57□□□□□ -0.4
VimP20152 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VimP20152 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm43094-201ENSMUST00000196549 921 ntBASIC12.57□□□□□ -0.4
VimP20152 Gm44335-201ENSMUST00000196879 141 ntBASIC12.57□□□□□ -0.4
VimP20152 Gm44297-201ENSMUST00000198304 141 ntBASIC12.57□□□□□ -0.4
VimP20152 Gm44346-201ENSMUST00000198851 141 ntBASIC12.57□□□□□ -0.4
VimP20152 Gm6458-201ENSMUST00000211573 635 ntBASIC12.57□□□□□ -0.4
VimP20152 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VimP20152 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.57□□□□□ -0.4
VimP20152 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
VimP20152 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.57□□□□□ -0.4
VimP20152 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.57□□□□□ -0.4
VimP20152 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VimP20152 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.57□□□□□ -0.4
VimP20152 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.56□□□□□ -0.4
VimP20152 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.56□□□□□ -0.4
VimP20152 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
VimP20152 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.56□□□□□ -0.4
VimP20152 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VimP20152 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.56□□□□□ -0.4
VimP20152 Gm12291-201ENSMUST00000121627 311 ntBASIC12.56□□□□□ -0.4
VimP20152 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms