Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm9083-201ENSMUST00000120423 819 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm14999-201ENSMUST00000121039 624 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm13570-201ENSMUST00000140763 309 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm29396-201ENSMUST00000185659 716 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm39404-201ENSMUST00000216350 313 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.83□□□□□ -0.68
PtcraP0C6B2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PtcraP0C6B2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm13392-201ENSMUST00000117708 150 ntBASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.82□□□□□ -0.68
PtcraP0C6B2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm2546-201ENSMUST00000182630 991 ntBASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm42693-201ENSMUST00000196779 631 ntBASIC10.82□□□□□ -0.68
PtcraP0C6B2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Morn2-202ENSMUST00000227729 656 ntBASIC10.82□□□□□ -0.68
PtcraP0C6B2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PtcraP0C6B2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms