Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm15573-201ENSMUST00000119487 540 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm8815-201ENSMUST00000173809 620 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm5714-201ENSMUST00000197343 566 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm45219-201ENSMUST00000205602 465 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm6867-201ENSMUST00000219165 425 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Hoxc8P09025 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.14□□□□□ -0.31
Hoxc8P09025 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc8P09025 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.13□□□□□ -0.31
Hoxc8P09025 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.13□□□□□ -0.31
Hoxc8P09025 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm22711-201ENSMUST00000116890 133 ntBASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm12579-201ENSMUST00000118040 783 ntBASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.13□□□□□ -0.31
Hoxc8P09025 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Hoxc8P09025 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.13□□□□□ -0.31
Hoxc8P09025 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.13□□□□□ -0.31
Hoxc8P09025 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc8P09025 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Hoxc8P09025 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hoxc8P09025 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms