Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CfdP03953 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CfdP03953 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
CfdP03953 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.37□□□□□ -0.75
CfdP03953 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CfdP03953 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.36□□□□□ -0.75
CfdP03953 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CfdP03953 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.36□□□□□ -0.75
CfdP03953 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.36□□□□□ -0.75
CfdP03953 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.36□□□□□ -0.75
CfdP03953 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CfdP03953 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.36□□□□□ -0.75
CfdP03953 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CfdP03953 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.36□□□□□ -0.75
CfdP03953 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
CfdP03953 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.35□□□□□ -0.75
CfdP03953 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.35□□□□□ -0.75
CfdP03953 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.35□□□□□ -0.75
CfdP03953 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CfdP03953 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm22189-201ENSMUST00000103822 86 ntBASIC10.35□□□□□ -0.75
CfdP03953 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Gm15487-201ENSMUST00000122373 465 ntBASIC10.35□□□□□ -0.75
CfdP03953 Gm23363-201ENSMUST00000175024 79 ntBASIC10.35□□□□□ -0.75
CfdP03953 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.35□□□□□ -0.75
CfdP03953 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.35□□□□□ -0.75
CfdP03953 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.35□□□□□ -0.75
CfdP03953 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.35□□□□□ -0.75
CfdP03953 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm16372-201ENSMUST00000073088 450 ntBASIC10.35□□□□□ -0.75
CfdP03953 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CfdP03953 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CfdP03953 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CfdP03953 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms