Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.08□□□□□ -0.96
TcraP01849 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
TcraP01849 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.08□□□□□ -0.96
TcraP01849 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
TcraP01849 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
TcraP01849 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.07□□□□□ -0.96
TcraP01849 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.07□□□□□ -0.96
TcraP01849 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.07□□□□□ -0.96
TcraP01849 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
TcraP01849 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
TcraP01849 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.07□□□□□ -0.96
TcraP01849 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Gm9630-201ENSMUST00000178304 885 ntBASIC9.07□□□□□ -0.96
TcraP01849 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.07□□□□□ -0.96
TcraP01849 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Gm9063-201ENSMUST00000223299 582 ntBASIC9.07□□□□□ -0.96
TcraP01849 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.07□□□□□ -0.96
TcraP01849 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.07□□□□□ -0.96
TcraP01849 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
TcraP01849 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
TcraP01849 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
TcraP01849 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.06□□□□□ -0.96
TcraP01849 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.06□□□□□ -0.96
TcraP01849 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
TcraP01849 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
TcraP01849 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms