Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igh-VJ558P01758 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Igh-VJ558P01758 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.73□□□□□ -0.69
Igh-VJ558P01758 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igh-VJ558P01758 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Gm24830-201ENSMUST00000102024 166 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Gm35960-201ENSMUST00000202712 767 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Gm26232-201ENSMUST00000083360 166 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.72□□□□□ -0.69
Igh-VJ558P01758 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm10434-201ENSMUST00000101158 471 ntBASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm2546-201ENSMUST00000182630 991 ntBASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Igh-VJ558P01758 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igh-VJ558P01758 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms