Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp1O89090 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp1O89090 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Sp1O89090 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp1O89090 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sp1O89090 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sp1O89090 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sp1O89090 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sp1O89090 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sp1O89090 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Sp1O89090 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Sp1O89090 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sp1O89090 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.52□□□□□ -0.41
Sp1O89090 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.52□□□□□ -0.41
Sp1O89090 Rprl1-201ENSMUST00000158050 327 ntBASIC12.52□□□□□ -0.41
Sp1O89090 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
Sp1O89090 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.52□□□□□ -0.41
Sp1O89090 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sp1O89090 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sp1O89090 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sp1O89090 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Sp1O89090 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sp1O89090 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Sp1O89090 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.51□□□□□ -0.41
Sp1O89090 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sp1O89090 Rps4l-202ENSMUST00000204242 789 ntBASIC12.51□□□□□ -0.41
Sp1O89090 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.51□□□□□ -0.41
Sp1O89090 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sp1O89090 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.51□□□□□ -0.41
Sp1O89090 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sp1O89090 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sp1O89090 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.51□□□□□ -0.41
Sp1O89090 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sp1O89090 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sp1O89090 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.5□□□□□ -0.41
Sp1O89090 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Sp1O89090 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sp1O89090 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms