Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Limk2O54785 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.62□□□□□ -0.39
Limk2O54785 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Gm27023-201ENSMUST00000182372 285 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Gm37201-201ENSMUST00000191845 523 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.62□□□□□ -0.39
Limk2O54785 Gm45186-201ENSMUST00000206874 478 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Gm13097-201ENSMUST00000210722 397 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Gm39404-201ENSMUST00000216350 313 ntBASIC12.62□□□□□ -0.39
Limk2O54785 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.62□□□□□ -0.39
Limk2O54785 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Limk2O54785 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Limk2O54785 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Limk2O54785 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Limk2O54785 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.61□□□□□ -0.39
Limk2O54785 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.61□□□□□ -0.39
Limk2O54785 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.61□□□□□ -0.39
Limk2O54785 Gm2546-201ENSMUST00000182630 991 ntBASIC12.61□□□□□ -0.39
Limk2O54785 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.61□□□□□ -0.39
Limk2O54785 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.61□□□□□ -0.39
Limk2O54785 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.61□□□□□ -0.39
Limk2O54785 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.61□□□□□ -0.39
Limk2O54785 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Limk2O54785 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Limk2O54785 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Limk2O54785 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.61□□□□□ -0.39
Limk2O54785 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Limk2O54785 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.6□□□□□ -0.39
Limk2O54785 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Limk2O54785 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.6□□□□□ -0.39
Limk2O54785 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Limk2O54785 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Limk2O54785 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Limk2O54785 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms