Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm44262-201ENSMUST00000204969 372 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm45598-202ENSMUST00000210719 986 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sdc4O35988 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.81□□□□□ -0.36
Sdc4O35988 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.81□□□□□ -0.36
Sdc4O35988 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sdc4O35988 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sdc4O35988 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc4O35988 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.8□□□□□ -0.36
Sdc4O35988 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.8□□□□□ -0.36
Sdc4O35988 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Sdc4O35988 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sdc4O35988 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sdc4O35988 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc4O35988 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Sdc4O35988 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.8□□□□□ -0.36
Sdc4O35988 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sdc4O35988 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sdc4O35988 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sdc4O35988 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Sdc4O35988 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.79□□□□□ -0.36
Sdc4O35988 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sdc4O35988 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sdc4O35988 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Gm24934-201ENSMUST00000103764 111 ntBASIC12.79□□□□□ -0.36
Sdc4O35988 Gm13996-201ENSMUST00000118456 430 ntBASIC12.79□□□□□ -0.36
Sdc4O35988 Gm11439-201ENSMUST00000118598 409 ntBASIC12.79□□□□□ -0.36
Sdc4O35988 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.79□□□□□ -0.36
Sdc4O35988 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sdc4O35988 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.79□□□□□ -0.36
Sdc4O35988 Gm9230-201ENSMUST00000188228 532 ntBASIC12.79□□□□□ -0.36
Sdc4O35988 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms