Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Stx1aO35526 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Stx1aO35526 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Stx1aO35526 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stx1aO35526 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.94□□□□□ -0.18
Stx1aO35526 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stx1aO35526 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Stx1aO35526 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Stx1aO35526 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.93□□□□□ -0.18
Stx1aO35526 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Stx1aO35526 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Stx1aO35526 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Stx1aO35526 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Stx1aO35526 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Stx1aO35526 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Stx1aO35526 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gm28911-201ENSMUST00000188837 117 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 Gm38092-201ENSMUST00000195600 653 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 Gm10146-201ENSMUST00000072739 309 ntBASIC13.93□□□□□ -0.18
Stx1aO35526 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Stx1aO35526 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Stx1aO35526 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Stx1aO35526 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.92□□□□□ -0.18
Stx1aO35526 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Stx1aO35526 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Stx1aO35526 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.92□□□□□ -0.18
Stx1aO35526 Gm9022-201ENSMUST00000182482 992 ntBASIC13.92□□□□□ -0.18
Stx1aO35526 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Gm2423-201ENSMUST00000074863 733 ntBASIC13.92□□□□□ -0.18
Stx1aO35526 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Stx1aO35526 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.92□□□□□ -0.18
Stx1aO35526 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Stx1aO35526 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.91□□□□□ -0.18
Stx1aO35526 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.91□□□□□ -0.18
Stx1aO35526 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.91□□□□□ -0.18
Stx1aO35526 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.91□□□□□ -0.18
Stx1aO35526 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.91□□□□□ -0.18
Stx1aO35526 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.91□□□□□ -0.18
Stx1aO35526 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Stx1aO35526 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Stx1aO35526 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Gm11964-201ENSMUST00000120982 444 ntBASIC13.91□□□□□ -0.18
Stx1aO35526 Gm12363-201ENSMUST00000122250 668 ntBASIC13.91□□□□□ -0.18
Stx1aO35526 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.91□□□□□ -0.18
Stx1aO35526 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Stx1aO35526 Gm27243-201ENSMUST00000183964 521 ntBASIC13.91□□□□□ -0.18
Stx1aO35526 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms