Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC18.75■□□□□ 0.59
Polr1aO35134 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC18.75■□□□□ 0.59
Polr1aO35134 Gm28324-201ENSMUST00000187913 264 ntBASIC18.75■□□□□ 0.59
Polr1aO35134 Gm37981-201ENSMUST00000194280 535 ntBASIC18.75■□□□□ 0.59
Polr1aO35134 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC18.75■□□□□ 0.59
Polr1aO35134 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Polr1aO35134 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Polr1aO35134 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Polr1aO35134 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Polr1aO35134 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr1aO35134 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.75■□□□□ 0.59
Polr1aO35134 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC18.74■□□□□ 0.59
Polr1aO35134 AC174797.2-202ENSMUST00000225729 568 ntBASIC18.74■□□□□ 0.59
Polr1aO35134 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Polr1aO35134 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Polr1aO35134 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Polr1aO35134 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Polr1aO35134 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC18.74■□□□□ 0.59
Polr1aO35134 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Gm26013-201ENSMUST00000104404 119 ntBASIC18.74■□□□□ 0.59
Polr1aO35134 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Polr1aO35134 Gm5380-201ENSMUST00000119296 2136 ntBASIC18.74■□□□□ 0.59
Polr1aO35134 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Polr1aO35134 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Gm9661-201ENSMUST00000221611 1122 ntBASIC18.74■□□□□ 0.59
Polr1aO35134 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC18.74■□□□□ 0.59
Polr1aO35134 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Polr1aO35134 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr1aO35134 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC18.73■□□□□ 0.59
Polr1aO35134 Gm11340-201ENSMUST00000119226 412 ntBASIC18.73■□□□□ 0.59
Polr1aO35134 Olfr584-201ENSMUST00000098210 964 ntBASIC18.73■□□□□ 0.59
Polr1aO35134 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr1aO35134 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr1aO35134 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Polr1aO35134 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Gm11422-201ENSMUST00000118925 1103 ntBASIC18.72■□□□□ 0.59
Polr1aO35134 Gm23218-201ENSMUST00000158124 276 ntBASIC18.72■□□□□ 0.59
Polr1aO35134 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Polr1aO35134 Gm44315-201ENSMUST00000203041 219 ntBASIC18.72■□□□□ 0.59
Polr1aO35134 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr1aO35134 AC136376.2-201ENSMUST00000228819 490 ntBASIC18.72■□□□□ 0.59
Polr1aO35134 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Polr1aO35134 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Polr1aO35134 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Polr1aO35134 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Polr1aO35134 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Polr1aO35134 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr1aO35134 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Polr1aO35134 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr1aO35134 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Polr1aO35134 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC18.71■□□□□ 0.59
Polr1aO35134 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms