Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.79□□□□□ -0.36
Trove2O08848 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Gm12928-201ENSMUST00000117115 573 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.78□□□□□ -0.36
Trove2O08848 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm6152-201ENSMUST00000151704 340 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm9630-201ENSMUST00000178304 885 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm27390-201ENSMUST00000184516 176 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Gm7063-201ENSMUST00000186840 981 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.78□□□□□ -0.36
Trove2O08848 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.78□□□□□ -0.36
Trove2O08848 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Gm18473-201ENSMUST00000220543 868 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trove2O08848 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.78□□□□□ -0.36
Trove2O08848 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trove2O08848 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trove2O08848 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.77□□□□□ -0.36
Trove2O08848 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trove2O08848 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.77□□□□□ -0.36
Trove2O08848 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.77□□□□□ -0.36
Trove2O08848 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trove2O08848 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Gm5687-201ENSMUST00000118252 640 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Gm14928-201ENSMUST00000120198 477 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.77□□□□□ -0.37
Trove2O08848 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Gm2495-201ENSMUST00000191160 466 ntBASIC12.77□□□□□ -0.37
Trove2O08848 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.77□□□□□ -0.37
Trove2O08848 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Gm6180-201ENSMUST00000065243 498 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Gm16372-201ENSMUST00000073088 450 ntBASIC12.77□□□□□ -0.37
Trove2O08848 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trove2O08848 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Trove2O08848 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.77□□□□□ -0.37
Trove2O08848 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.77□□□□□ -0.37
Trove2O08848 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trove2O08848 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.77□□□□□ -0.37
Trove2O08848 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.77□□□□□ -0.37
Trove2O08848 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trove2O08848 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms