Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.42□□□□□ -0.26
Ube3aO08759 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube3aO08759 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3aO08759 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm12928-201ENSMUST00000117115 573 ntBASIC13.42□□□□□ -0.26
Ube3aO08759 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube3aO08759 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3aO08759 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm28911-201ENSMUST00000188837 117 ntBASIC13.42□□□□□ -0.26
Ube3aO08759 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.42□□□□□ -0.26
Ube3aO08759 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube3aO08759 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.42□□□□□ -0.26
Ube3aO08759 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.42□□□□□ -0.26
Ube3aO08759 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3aO08759 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.42□□□□□ -0.26
Ube3aO08759 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3aO08759 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3aO08759 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm24231-201ENSMUST00000104315 133 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm8805-201ENSMUST00000117848 313 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm9002-201ENSMUST00000178437 499 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm2495-201ENSMUST00000191160 466 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.41□□□□□ -0.26
Ube3aO08759 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.41□□□□□ -0.26
Ube3aO08759 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ube3aO08759 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3aO08759 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ube3aO08759 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Gm11637-201ENSMUST00000120601 592 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.4□□□□□ -0.26
Ube3aO08759 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms