Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
MsmbO08540 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
MsmbO08540 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
MsmbO08540 Gm23270-201ENSMUST00000104055 131 ntBASIC9.57□□□□□ -0.88
MsmbO08540 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
MsmbO08540 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
MsmbO08540 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.57□□□□□ -0.88
MsmbO08540 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Gm17376-201ENSMUST00000166016 84 ntBASIC9.57□□□□□ -0.88
MsmbO08540 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.57□□□□□ -0.88
MsmbO08540 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.57□□□□□ -0.88
MsmbO08540 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.57□□□□□ -0.88
MsmbO08540 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
MsmbO08540 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MsmbO08540 Gm8862-201ENSMUST00000198379 1346 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
MsmbO08540 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
MsmbO08540 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
MsmbO08540 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
MsmbO08540 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Gm24255-201ENSMUST00000104481 128 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
MsmbO08540 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Rmrp-201ENSMUST00000157463 271 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Gm26956-201ENSMUST00000182176 986 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.56□□□□□ -0.88
MsmbO08540 Gm38241-201ENSMUST00000192641 898 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Gm4857-201ENSMUST00000192718 785 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Gm37259-201ENSMUST00000193903 849 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.56□□□□□ -0.88
MsmbO08540 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.56□□□□□ -0.88
MsmbO08540 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.56□□□□□ -0.88
MsmbO08540 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.56□□□□□ -0.88
MsmbO08540 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.56□□□□□ -0.88
MsmbO08540 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
MsmbO08540 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
MsmbO08540 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.55□□□□□ -0.88
MsmbO08540 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
MsmbO08540 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
MsmbO08540 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
MsmbO08540 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms