Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm11980-201ENSMUST00000121445 986 ntBASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm3619-201ENSMUST00000219947 775 ntBASIC11.67□□□□□ -0.54
Colca2F8VPY8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.67□□□□□ -0.54
Colca2F8VPY8 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Gm8325-201ENSMUST00000099086 453 ntBASIC11.67□□□□□ -0.54
Colca2F8VPY8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm20392-201ENSMUST00000173047 701 ntBASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm18367-201ENSMUST00000176139 600 ntBASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm43852-201ENSMUST00000202098 917 ntBASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Mir483-201ENSMUST00000093631 73 ntBASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.66□□□□□ -0.54
Colca2F8VPY8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.65□□□□□ -0.54
Colca2F8VPY8 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.65□□□□□ -0.54
Colca2F8VPY8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.65□□□□□ -0.54
Colca2F8VPY8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Colca2F8VPY8 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms