Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm28038F7BCN9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm7340-201ENSMUST00000119729 2752 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm11978-201ENSMUST00000122315 466 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm22764-201ENSMUST00000158370 92 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm27618-201ENSMUST00000183671 60 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm43058-201ENSMUST00000197645 625 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm44237-201ENSMUST00000205183 936 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm19078-201ENSMUST00000206311 727 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 AC159886.1-201ENSMUST00000217099 1091 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Gm28038F7BCN9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.34□□□□□ -0.91
Gm28038F7BCN9 Gm17046-201ENSMUST00000168078 850 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms