Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
TprF6ZDS4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm23363-201ENSMUST00000175024 79 ntBASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm19187-201ENSMUST00000206781 892 ntBASIC11.45□□□□□ -0.58
TprF6ZDS4 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.45□□□□□ -0.58
TprF6ZDS4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.45□□□□□ -0.58
TprF6ZDS4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TprF6ZDS4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm37246-201ENSMUST00000192665 835 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm4868-201ENSMUST00000164138 789 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.44□□□□□ -0.58
TprF6ZDS4 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TprF6ZDS4 Mir339-201ENSMUST00000083659 96 ntBASIC11.44□□□□□ -0.58
TprF6ZDS4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm14274-201ENSMUST00000117182 615 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm5257-201ENSMUST00000121823 790 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm32999-201ENSMUST00000192693 562 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm45598-202ENSMUST00000210719 986 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.43□□□□□ -0.58
TprF6ZDS4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TprF6ZDS4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.43□□□□□ -0.58
TprF6ZDS4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms