Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
R3hdm1E9Q9Q2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Gm19353-201ENSMUST00000184561 445 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
R3hdm1E9Q9Q2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm13736-201ENSMUST00000119272 253 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm10051-201ENSMUST00000145209 414 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm6963-201ENSMUST00000147879 379 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
R3hdm1E9Q9Q2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.22
R3hdm1E9Q9Q2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
R3hdm1E9Q9Q2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
R3hdm1E9Q9Q2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
R3hdm1E9Q9Q2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
R3hdm1E9Q9Q2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms