Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh17E9PXF0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm27023-201ENSMUST00000182372 285 ntBASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh17E9PXF0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm11439-201ENSMUST00000118598 409 ntBASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm26361-201ENSMUST00000158868 186 ntBASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh17E9PXF0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms