Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmf1B9EKI3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Gm13461-201ENSMUST00000120980 662 ntBASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Gm25700-201ENSMUST00000177693 110 ntBASIC16.79■□□□□ 0.28
Tmf1B9EKI3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmf1B9EKI3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm26361-201ENSMUST00000158868 186 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm32999-201ENSMUST00000192693 562 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm44124-201ENSMUST00000204159 472 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm45224-201ENSMUST00000208203 414 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmf1B9EKI3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmf1B9EKI3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmf1B9EKI3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmf1B9EKI3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmf1B9EKI3 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.77■□□□□ 0.28
Tmf1B9EKI3 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms