Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm10807-201ENSMUST00000177134 795 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm37981-201ENSMUST00000194280 535 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm45594-201ENSMUST00000211717 241 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm25766-201ENSMUST00000104101 131 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm7150-201ENSMUST00000122032 981 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm28937-201ENSMUST00000185413 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm29400-201ENSMUST00000187208 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm28662-201ENSMUST00000188446 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm28251-201ENSMUST00000188835 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm37318-201ENSMUST00000194325 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm38017-201ENSMUST00000194768 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm37287-201ENSMUST00000195449 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm37793-201ENSMUST00000195548 695 ntBASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a6B1AVK5 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Mir6407-201ENSMUST00000184510 101 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm42779-201ENSMUST00000198807 406 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm43610-201ENSMUST00000199117 365 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm6450-201ENSMUST00000200896 574 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm44315-201ENSMUST00000203041 219 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms