Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm8738-201ENSMUST00000172606 329 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm6222-202ENSMUST00000182143 629 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm45784-201ENSMUST00000188360 142 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm18584-201ENSMUST00000203098 964 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm13226-201ENSMUST00000117838 404 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm13829-201ENSMUST00000119600 138 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm7809-201ENSMUST00000153199 742 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm22058-201ENSMUST00000083393 310 ntBASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Trav9n-2A0A0G2JDP3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms