Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm13517-201ENSMUST00000120782 1495 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Gm27741-201ENSMUST00000185060 237 ntBASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 AC169036.1-201ENSMUST00000227994 296 ntBASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.88□□□□□ -0.99
Trav8-1A0A075B641 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22065-201ENSMUST00000103753 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22066-201ENSMUST00000103761 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24932-201ENSMUST00000103763 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24115-201ENSMUST00000103799 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22190-201ENSMUST00000103827 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22191-201ENSMUST00000103831 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24721-201ENSMUST00000103849 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm28018-201ENSMUST00000103869 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm26399-201ENSMUST00000103937 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25349-201ENSMUST00000177728 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm23616-201ENSMUST00000177797 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25871-201ENSMUST00000177816 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24752-201ENSMUST00000178240 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24496-201ENSMUST00000178287 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25649-201ENSMUST00000178476 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25548-201ENSMUST00000178681 110 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms