Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.52□□□□□ -0.41
Mrpl40Q9Z2Q5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl40Q9Z2Q5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm17376-201ENSMUST00000166016 84 ntBASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Gm6082-201ENSMUST00000215204 454 ntBASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.5□□□□□ -0.41
Mrpl40Q9Z2Q5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl40Q9Z2Q5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms