Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Crlf3Q9Z2L7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crlf3Q9Z2L7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.56□□□□□ -0.4
Crlf3Q9Z2L7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms