Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn8aQ9WTU3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm26461-201ENSMUST00000175064 290 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 AY036118-201ENSMUST00000200021 923 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.43□□□□□ -0.42
Scn8aQ9WTU3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.42□□□□□ -0.42
Scn8aQ9WTU3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.41□□□□□ -0.42
Scn8aQ9WTU3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms