Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 GPR182-203ENST00000622922 591 ntBASIC17.38■□□□□ 0.37
COL20A1Q9P218 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 AC136621.1-201ENST00000624017 2304 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 BRWD1P1-201ENST00000401091 371 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 CD8B2-202ENST00000417670 633 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 POM121L8P-201ENST00000417732 1281 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 POM121L9P-203ENST00000441984 1285 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 REXO1L4P-201ENST00000605109 1937 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.37■□□□□ 0.37
COL20A1Q9P218 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.37■□□□□ 0.37
COL20A1Q9P218 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL20A1Q9P218 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 TPM3P8-201ENST00000330554 643 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 MIR326-201ENST00000362220 95 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 GHSR-202ENST00000427970 912 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 ZNF767P-206ENST00000513792 565 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 C2orf69P2-201ENST00000562032 1123 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 AC112693.3-201ENST00000624819 1983 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 AL360270.3-201ENST00000609118 1348 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 HYMAI-201ENST00000635591 3347 ntBASIC17.36■□□□□ 0.37
COL20A1Q9P218 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms