Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
U2af1Q9D883 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
U2af1Q9D883 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
U2af1Q9D883 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm24934-201ENSMUST00000103764 111 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm12015-201ENSMUST00000117065 843 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm6963-201ENSMUST00000147879 379 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.33■□□□□ 0.2
U2af1Q9D883 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.33■□□□□ 0.2
U2af1Q9D883 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.33■□□□□ 0.2
U2af1Q9D883 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
U2af1Q9D883 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm15236-201ENSMUST00000117309 379 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm45224-201ENSMUST00000208203 414 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
U2af1Q9D883 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.32■□□□□ 0.2
U2af1Q9D883 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
U2af1Q9D883 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.31■□□□□ 0.2
U2af1Q9D883 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms