Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1aQ9D132 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.75□□□□□ -0.53
Upk1aQ9D132 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm10156-201ENSMUST00000122364 462 ntBASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm7287-201ENSMUST00000205267 602 ntBASIC11.75□□□□□ -0.53
Upk1aQ9D132 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.75□□□□□ -0.53
Upk1aQ9D132 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.75□□□□□ -0.53
Upk1aQ9D132 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1aQ9D132 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Gm11964-201ENSMUST00000120982 444 ntBASIC11.74□□□□□ -0.53
Upk1aQ9D132 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.74□□□□□ -0.53
Upk1aQ9D132 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1aQ9D132 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms