Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chd1lQ9CXF7 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Gm14719-201ENSMUST00000121891 340 ntBASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Gm6152-201ENSMUST00000151704 340 ntBASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Gm16372-201ENSMUST00000073088 450 ntBASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chd1lQ9CXF7 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm16296-201ENSMUST00000159905 325 ntBASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chd1lQ9CXF7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Gm45053-201ENSMUST00000206112 2499 ntBASIC14□□□□□ -0.17
Chd1lQ9CXF7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Gm12341-201ENSMUST00000119724 503 ntBASIC14□□□□□ -0.17
Chd1lQ9CXF7 Gm23363-201ENSMUST00000175024 79 ntBASIC14□□□□□ -0.17
Chd1lQ9CXF7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Gm43575-201ENSMUST00000196420 516 ntBASIC14□□□□□ -0.17
Chd1lQ9CXF7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chd1lQ9CXF7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms