Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn1Q9CWM4 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Spata33-207ENSMUST00000212760 4074 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pfdn1Q9CWM4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Gm33142-201ENSMUST00000193913 867 ntBASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pfdn1Q9CWM4 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms