Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm7722-201ENSMUST00000120646 741 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm6867-201ENSMUST00000219165 425 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldnd1Q9CQX5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Gm11663-201ENSMUST00000117888 290 ntBASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Gm23119-201ENSMUST00000158610 140 ntBASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Gm37299-201ENSMUST00000193951 826 ntBASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldnd1Q9CQX5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm26286-201ENSMUST00000104166 134 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm9645-201ENSMUST00000197131 792 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm44980-201ENSMUST00000205826 314 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm19091-201ENSMUST00000208120 978 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms